• Journal Articles

  • Fattahi, A. and M. Turkay, A One Direction Search Method to Find the Exact Nondominated Frontier of Biobjective Mixed-Binary Linear Programming Problems, Eur. J. Opers. Res. xxx(xx), xxx-xxx (2017) >
  • Anvari, S. and M. Turkay, The Facility Location Problem from the Perspective of Triple Bottom Line Accounting of Sustainability,  Int. J. Prod. Res., 55(21) 6266-6287 (2017) >
  • Kabatepe, B. and M. Turkay, A Bi-Criteria Optimization Model to Analyze the Impact of Electric Vehicles on Costs and Emissions, Comp. Chem. Eng. 102, 156-168 (2017) >
  • Turkay, M., O. Saracoglu and M.C. Arslan, Sustainability in Supply Chain Management: Aggregate Planning from Sustainability Perspective, PLoS ONE, 11(1): e0147502 (2016) >
  • Ozturk, A and M. Turkay, Bicriteria Optimization Approach to Analyze Incorporation of Biofuel and Carbon Capture Technologies, AIChE J.,62(9), 3473-3483 (2016) >  Suppl 1  Suppl 2
  • Anvari, S., S. Tuna, M. Canci and M. Turkay, Automated Box-Jenkins forecasting tool with an application for passenger demand in urban rail systems, J. Adv. Transportation, 50 (1), 25-49 (2016) >
  • Tardu, M., F. Rahim, I.H. Kavakli and M. Turkay, MILP-Hyperbox Classification for Structure-Based Design Design in the Discovery of Small Molecule Inhibitors of Sirtuin6, RAIRO-OR, 50(2), 387-400 (2016)  >
  • Turkay, M., G. Felici, M. Szachniuk and P. Lukasiak, Recent Advances in Operations Research in Computational Biology, Bioinformatics and Medicine, RAIRO-OR, 50(2), 327-330 (2016) (editorial for Special Issue) >
  • Dreval, A.V., T.P. Shestakova, M. Turkay, O.A. Dreval, D.A. Kulikov, O.S. Medvedev, Comparison of the results of blood glucose self-monitoring and continuous glucose monitoring in pregnant women with previous diabetes mellitus, Almanac of Clinical Medicine, 43 (2015), 66-71 >
  • Resat, H.G. and M. Turkay, Design and operation of intermodal transportation network in the Marmara region of Turkey, Transp.Res. Part E, 83, 16-33 (2015) >
  • Shahraki N., H. Cai, M. Turkay and M. Xu, Optimal Locations of Electric Public Charging Stations Using Real World Vehicle Travel Patterns, Transp.Res. Part D, 41, 165-176 (2015) >
  • Fattahi, A. and M. Turkay, On the MILP Model for the U-shaped Assembly Line Balancing Problems, Eur. J. Opers. Res. 242(1), 343-346 (2015) >
  • Saracoglu, O., M.C. Arslan and M. Turkay, Aggregate Planning Problem from Sustainability Perspective, ICALT 2015, 181-186 (2015) >
  • Turkay, M. Turkey's Chemical Industry Expands into Global Markets, Chem. Eng. Progr., 111(5), 50-54 (2015) >
  • Fattahi, A. and M. Turkay,  e-OA for the Solution of Bi-Objective Generalized Disjunctive Programming Problems in the Synthesis of Nonlinear Process Networks,  Computers and Chem. Eng., 72, 199-209 (2015) >
  • Vaskan, P, G. Guillen-Gosalbez, M. Turkay and L. Jimenez-Esteller, Multi-objective optimization of utility plants under several environmental indicators using an MILP-based dimensionality reduction approach, Ind. Eng. Chem. Res., 53(50), 19559-19572 (2014) >
  • Weber, G.W., J. Blazewicz, M. Rauner and M. Turkay, Recent advances in computational biology, bioinformatics, medicine and healthcare by modern OR, C. Eur. J. Ops. Res., 22(3), 427-430 (2014) (editorial for Special Issue) >
  • Shahraki, N. and M.Turkay, Analysis of Interaction Among Land-Use, Transportation Network and Air Pollution using Stochastic Nonlinear Programming, Int.J. Env. Sci and Tech., 11(8), 2201-2216 (2014) >
  • Fattahi, A., S. Elaoud, E.S. Azer and M. Turkay, A Novel integer programming formulation with logic cuts for the U-shaped assembly line balancing problem,  Int. J. Prod. Res., 52(5) 1318-1333 (2014) >
  • Kaya, O., F. Bagci and M. Turkay, Planning of capacity, production and inventory decisions in a generic reverse supply chain under uncertain demands and returns, Int. J. Prod. Res., 52(1) 270-282 (2014) >
  • Arslan, M.C. and M. Turkay, EOQ Revisited with Sustainability Considerations, Foundations of Computing and Decision Sciences, 38(4), 223-249 (2013) >
  • Donmez, I. and M. Turkay, Design of reverse logistics network for waste batteries with an application in Turkey, Chem. Eng. Trans., 35, 1293-1298 (2013) >
  • Masmoudi, Y., M. Turkay and H. Chabchoub, A Binarization Strategy for Modelling Mixed Data in Multigroup Classification, IEEE Advanced Logistics and Transport, 347-353 (2013) >
  • Cakir, B., O. Dagliyan, E. Dagyildiz, I. Baris, I.H. Kavakli, S. Kizilel and M. Turkay, Structure Based Discovery of Small Molecules to Regulate the Activity of Human Insulin Degrading Enzyme, PLoS ONE, 7(2), e31787 (2012) >
  • Dagliyan, O., F. Uney-Yuksektepe, I.H. Kavakli and M. Turkay, Optimization Based Tumor Classification from Microarray Gene Expression Data, PLoS ONE, 6(2), e14579 (2011) > Suppl
  • Kaplan, U, M. Turkay. B. Karasozen and Biegler, L.T., Optimization of Supply Chain Systems with Price Elasticity of Demand, Informs Journal on Computing, 23(4) 557-568 (2011) >
  • Atalay, S., M. Canci, G. Kaya, C. Oguz and Turkay, M., Intermodal Transportation in Istanbul via Marmaray Project, IBM J. Res. & Dev., 54(6) 9:1-9:10 (2010) >
  • Bertolazzi, P., J. Blazewicz, and M. Turkay, Operations Research Models for Computational Biology, Bioinformatics and Medicine, J. Math. Mod. & Alg., 9(3), 209-211 (2010) (editorial for Special Issue) >
  • Turkay, M., Karasozen, B., Biegler, L.T., McAvoy, T.J., Hybrid systems: Modeling, simulation and optimization, Journal of Process Control, 19(8), 1217-1217 (2009) (editorial for Special Issue) >
  • Dagliyan, O., Kavakli, I.H., Turkay, M., Classification of Cytochrome P450 Inhibitors with Respect to Binding Free Energy and pIC(50) Using Common Molecular Descriptors, J. of Chem. Inf & Mod., 49(10), 2403-2411 (2009) >
  • Armutlu,P., M.E. Ozdemir, S. Ozdas, I.H. Kavakli and M. Turkay, "Discovery of Novel CYP17 Inhibitors for the Treatment of Prostate Cancer with Structure-Based Drug Design", Letters in Drug Design and Discovery, 6(5), 337-344 (2009) >
  • Kaplan, U., M. Turkay, L.T. Biegler and B. Karasozen, "Modeling and Simulation of Metabolic Networks for Estimation of Biomass Accumulation Parameters", Discrete Applied Mathematics, 157(10), 2483-2493 (2009) >
  • Yucel, E., F. Karaesmen, F. S. Salman and M. Turkay, Optimizing Product Assortment Under Customer-driven Demand Substitution, European Journal of Operational Research, 199(2009), 759-768 (2009) >
  • Armutlu, P.,  M.E. Ozdemir, F. Uney-Yuksektepe, I.H. Kavakli and M. Turkay, Classification of drug molecules considering their IC50 values using mixed-integer linear programming based hyper-boxes method, BMC Bioinformatics, 9, 411 (2008) >
  • Ucyigitler, S., M.C. Camurdan, M. Turkay and J.R. Elliott, Inferring transferable intermolecular potential models, Molecular Simulation, 34(2), 147-154 (2008) >
  • Uney Yuksektepe, F., O. Yilmaz and M. Turkay, "Prediction of Secondary Structures of Proteins using a Two-Stage Method", Comput. Chem. Eng., 32(1-2), 78-88 (2008) > Suppl
  • Yogurtcu, O.M., S.B. Erdemli, R. Nussinov, M. Turkay, and O. Keskin, "Restricted Mobility of Conserved Residues in Protein-Protein Interfaces in Molecular Simulations", Biophysical Journal, 94(9), 3475-3485 (2008) > Suppl
  • Kahraman, P. and M. Turkay, "Classification of 1,4-Dihydropyridine Calcium Channel Antagonists using Hyper-Box Approach", Ind. Eng. Chem. Res., 46(14), 4921-4929 (2007) >
  • Mestan, E., M. Turkay and Y. Arkun, "Optimization of Operations in Supply Chain Systems Using Hybrid Systems Approach and Model Predictive Control", Ind. Eng. Chem. Res., 45(19), 6493 - 6503 (2006) >
  • Uney, F. and M. Turkay, "A Mixed-Integer Programming Approach to Multi-Class Data Classification Problem", European Journal of Operational Research, 173(3), 910-920 (2006) >
  • Saglam, B., F.S. Salman, S. Sayin, and M. Turkay, "A Mixed-Integer Programming Approach to the Clustering Problem with An Application in Customer Segmentation", European Journal of Operational Research,  173(3), 866-879 (2006) >
  • Soylu, A., C. Oruc, M. Turkay, K. Fujita, and T. Asakura, "Synergy Analysis of Collaborative Supply Chain Management in Energy Systems using Multi-Period MILP", European Journal of Operational Research, 174(1), 387-403 (2006) > Suppl
  • Gursoy, A., O. Keskin, M. Turkay, and B. Erman, "Relationships between Unfolded Configurations of Proteins and Dynamics of Folding to the Native State", J. Polymer Sci. Part B: Polymer Phys, 44, 3667-3678 (2006) >
  • Turkay, M., C. Oruç, K. Fujita, and T. Asakura, "Multi-Company Collaborative Supply Chain Management with Economical and Environmental Considerations", Comput. Chem. Eng., 28(6-7), 985-992 (2004) >
  • Keskin, O., D. Yuret, A. Gursoy, M. Turkay, and B. Erman, "Relationships Between Amino Acid Sequence and Backbone Torsion Angle Preferences and Correlations in Proteins", Proteins: Structure, Function, and Bioinformatics, 55(4), 992-998 (2004) >
  • Turkay, M., and I.E. Grossmann, "Tight Mixed-Integer Optimization Models for the Solution of Linear and Nonlinear Systems of Disjunctive Equations", Comput. Chem. Engng., 22(9), 1229-1239 (1998) >
  • Turkay, M., and I.E. Grossmann, "Structural Flowsheet Optimization with Complex Investment Cost Functions", Comput. Chem. Engng., 22(4-5), 673-686 (1998) >
  • Turkay, M., and I.E. Grossmann, "Disjunctive Programming Techniques for the Optimization of Process Systems with Discontinuous Investment Costs-Multiple Size Regions", Ind. Eng. Chem. Res., 35(8), 2611-2623 (1996) >
  • Grossmann, I.E. and M. Turkay, "Solution of Algebraic Systems of Disjunctive Equations", Comput. Chem. Engng., 20(S1), S339-S344 (1996) >
  • Turkay, M., and I.E. Grossmann, "Logic-Based MINLP Algorithms for the Optimal Synthesis of Process Networks", Comput. Chem. Engng., 20(8), 959-978 (1996). (1997 AIChE/CAST Division Ted Peterson Award) >
  • Turkay, M., T. Gurkan and C. Ozgen, "Synthesis of Regulatory Control Structures for a Styrene Plant", Comput. Chem. Engng., 17(5-6), 601-608 (1993) >
  • Supplementary Materials for publications

     

     

  • Books and Book Chapters

  • Shahraki N. and M. Turkay, Urban Logistics: Multi-modal Transportation Network Design Accounting for Stochastic Passenger Demand and Freight Logistics, pp.131-148, M. Lu and J. De Bock (Eds.) Sustainable Logistics and Supply Chains, Springer, Heidelberg, Germany (2015). >

  • Resat G. and M. Turkay, Transport and Logistics Models for Sustainability, Sustainability of Products, Processes and Supply Chains: Theory and Applications, Fengqi You (Ed.), Elsevier, Amsterdam, The Netherlands (2015). >

  • Yılmaz Ozbagci, S., B. San Akca and M. Turkay, Energy Efficiency Map of Turkey (2013) (in Turkish) >

  • Turkay, M. and M. Canci, "Planning Automotive Logistics in Marmara Region", OSD Publications, Istanbul, Turkey (2008)  (in Turkish) >

  • Turkay, M. and F.Uney-Yuksektepe, "Multi-class data classification via mixed-integer optimization", Encyclopedia of Optimization, 2nd ed., C.A. Floudas and P.M. Pardalos (Eds.), 2348-2354, Springer, Dordrecht, The Nederlands (2008).

  •  Turkay, M. and U. Kaplan, "Integrated Planning and Scheduling", Encyclopedia of Optimization, 2nd ed., C.A. Floudas and P.M. Pardalos (Eds.), 2348-2354, Springer, Dordrecht, The Nederlands (2008).

  • F.Uney-Yuksektepe and M. Turkay, "Multi-Group Data Classification via Mixed-Integer Linear Programming Based Hyper-Box Enclosure Approach", Encyclopedia of Data Warehousing and Mining, 2nd ed., J. Wang (ed.), Information Science Reference, Hershey, PA (2008),

  • Turkay, M. "Environmentally Conscious Supply Chain Management", Process Systems Engineering, vol 3: Supply Chain Optimization, L. Papageorgiou and M. Georgiadis (Eds.), Chapter 3, 45-86, WILEY-VCH, Weinheim (2008).

  • Eraslan, I.H., M. Bulu. and M. Turkay, "Clustering Analysis of Networked Organizations", Encyclopedia of Networked and Virtual Organizations, G.D. Putnik and M.M. Cunha (Eds.), vol. I, 199-208, Information Science Reference, Hershey, PA (2008).

  • Kahraman, P. and M. Turkay, "QSAR Analysis of 1,4-Dihydropyridine Calcium Channel Antagonists", Computer-Aided Chem. Eng., vol 24: ESCAPE-17, V. Plesu and P.S. Agachi (Eds.), 977-982, Elsevier, Amsterdam (2007).

  • Turkay, M. and U. Kaplan, "Optimization Methods and Its Applications in Organic Agriculture", Strategies and Applications in Realizing Sustainable Competitive Advantage in Organic Agriculture, I.H. Eraslan and F. Selli (Eds.), 373-394, International Competitiveness Research Institute Publications, Istanbul (2006). (in Turkish)

  • Turkay,M. "Optimization Models and Solution Algorithms", New Frontiers in Total Quality and Strategic Management, S. Kingir (Ed.), 309-328, Gazi Publishing, Ankara (2006). (in Turkish)

  • Uney-Yuksektepe, F. and M. Turkay, "Data Mining", New Frontiers in Total Quality and Strategic Management, S. Kingir (Ed.), 141-152, Gazi Publishing, Ankara (2006). (in Turkish)

  • Turkay, M. and A. Soylu, "Synergy Analysis of Collaboration with Biofuel Use for Environmentally Conscious Energy Systems", Computer-Aided Chem. Eng., vol 21B: ESCAPE-16, W. Marquardt and C. Pantelides (Eds.), 1827-1832, Elsevier, Amsterdam (2006)

  • Turkay, M., O. Yilmaz and F. Uney-Yuksektepe, "Prediction of Secondary Structures of Proteins Using a Two-Stage Method", Computer-Aided Chem. Eng., vol 21B: ESCAPE-16, W. Marquardt and C. Pantelides (Eds.), 1679-1685, Elsevier, Amsterdam (2006).

  • Turkay, M., F. Uney and O. Yilmaz, "Prediction of Folding Type of Proteins Using Mixed-Integer Linear Programming", Computer-Aided Chem. Eng., vol 20A: ESCAPE-15, L. Puigjaner and A. Espuna (Eds.), 523-528, Elsevier, Amsterdam (2005).

  • Turkay M., T. Asakura, K. Fujita, C.W. Hui, Y. Natori, Y. Masaiwa, H. Oonishi, and I.B. Tjoa, "Total Site Optimization of a Petrochemical Complex", AIChE Symposium Series, vol. 94, G. Blau and J. Pekny (Eds.), 185-189 (1998).

  • Turkay, M., and I.E. Grossmann, "Logic-Based Outer-Approximation and Benders Decomposition Algorithms for the Synthesis of Process Networks", State of the Art in Global Optimization: Computational Methods and Applications, C.A. Floudas and P.M. Pardalos (Eds.), 585-607 (1996).

 

  • Patents

  • Turkay, M, S. Kizilel, I.H. Kavakli, B. Cakir, O. Dagliyan, A Molecule regulating activity of Insulin Degrading Enzyme (IDE), WO/2013/004525, PCT/EP2012/062186, 10.01.2013 >
  • Turkay, M, S. Kizilel, I.H. Kavakli, B. Cakir, O. Dagliyan, A Molecule regulating activity of Insulin Degrading Enzyme (IDE), WO/2013/004556, PCT/EP2012/062404, 10.01.2013 >
  • Turkay, M, S. Kizilel, I.H. Kavakli, B. Cakir, O. Dagliyan, A Molecule regulating activity of Insulin Degrading Enzyme (IDE), WO/2013/004527, PCT/EP2012/062190, 10.01.2013 >
  • Turkay, M, S. Kizilel, I.H. Kavakli, B. Cakir, O. Dagliyan, A Molecule regulating activity of Insulin Degrading Enzyme (IDE), WO/2013/004557, PCT/EP2012/062409, 10.01.2013 >
  • Turkay, M, S. Kizilel, I.H. Kavakli, B. Cakir, O. Dagliyan, Insulin parcalayan enzimin (IDE) aktivitesini duzenleyen bir molekul, Turk Patent Enstitusu, Patent No: TP 2013 15181 B, 25.06.2012
  • Turkay, M, S. Kizilel, I.H. Kavakli, B. Cakir, O. Dagliyan, Insulin parcalayan enzimin (IDE) aktivitesini duzenleyen bir molekul, Turk Patent Enstitusu, Patent No: TP 2013 15182 B, 25.06.2012
  • Turkay, M, S. Kizilel, I.H. Kavakli, B. Cakir, O. Dagliyan, Insulin parcalayan enzimin (IDE) aktivitesini duzenleyen bir molekul, Turk Patent Enstitusu, Patent No: TP 2013 15183 B, 27.06.2012
  • Turkay, M, S. Kizilel, I.H. Kavakli, B. Cakir, O. Dagliyan, Insulin parcalayan enzimin (IDE) aktivitesini duzenleyen bir molekul, Turk Patent Enstitusu, Patent No: TP 2013 15184 B, 27.06.2012
  • Asakura, T., M. Turkay () , Y. Masaiwa, H. Onishi, and S. Takeshita, "Optimization System for Production Planning", Japan Patent 2001-255925 >

  • Takeshita S., H. Onishi, Y. Masaiwa, M. Turkay (), and T. Asakura, "Optimization System for Plant Repair Plan", Japan Patent 2001-256421 >

 

  • Peer Reviewed Conference Proceedings

  • Armutlu P, M.E. Ozdemir, M. Turkay, I.H. Kavakli, "Prostat Kanserine Karsi Ilaç Gelistirme",  Proceedings of 13. Ulusal Biyomedikal Mühendisligi Toplantisi. BIYOMUT 08, METU, Ankara, May 2008. (in Turkish).

  • Ozdemir, M.E., H. Kavakli and M. Turkay, "Structure-based design and analysis of cytochrome P450 inhibitors for the treatment of prostate cancer", Proc. BIOCOMP'06, Eds.: H.R. Arabnia and H. Valafar, 378-384 (2006).
  • Yucel, E., F. Karaesmen, S. Salman and M.Turkay, "Product Assortment under Customer-Driven Demand Substitution in Retail Operations", Proc. IC-ILS, (2006).
  • Soylu, A. and M. Turkay, "Synergy Analysis of Collaborating Energy Production Systems", Proc. IC-ILS, (2006).

  •  Soylu, A. and M. Turkay, Linear Programming Approach to Develop Optimal Plans for Transition to Renewable Energy Sources, Yeksem-III. Renewable Energy Sources Symposium, 1-5 (2005). (in Turkish)

  • Turkay, M., "Structural Synthesis of Small Molecule Drug Candidates", Proc. FOCAPD 2004, 395-398 (2004).

  • Bakan, A., O.N. Yogurtcu, M. Turkay, A. Gursoy, B. Erman, "Drug Design using Internet Resources", EuroQSAR 2004 Proceedings: QSAR Modeling in Rational Design of Bioactive Molecules, Eds.: E. Aki (Sener) and I. Yalcin, 526-527 (2004).

  • Turkay, M., "Multi-Company Collaborative Supply Chain Management for the Improvement of Financial and Environmental Performance", Proc. EMCC-3 (2003).

  • Turkay, M., K. Fujita. and T. Asakura, "Supply Chain Integration at Industrial Zones: Energy Integration", Proc. FOCAPO 2003, 217-220 (2003).

  • Takeshita T., T. Asakura, M. Turkay and K. Fujita,

    The Operations Research Society of Japan, Vol.2000(20000927) pp. 216-217 (2000). >

  • Turkay, M., C. Ozgen and T. Gurkan, "Performance Evaluation of Control System Structure for a Monomer Plant", Proc. SICICI'92, Singapore (1992).


Metin Turkay
Professor
Department of Industrial Engineering
Koc University
Rumelifeneri Yolu, 34450 Sariyer, Istanbul, Turkey
Tel: +90 (212) 338-1586
Fax: +90 (212) 338-1548
E-Mail: mturkay@ku.edu.tr